Hiroyuki Nagashima, Ph.D.

Summary

Dr. Nagashima received his Ph.D. in 2016 from the Department of Microbiology and Immunology at Tohoku University. He studied the role of TNF-receptor-associated factors (TRAFs) in the activation and memory formation of T-helper (Th) cells. His work revealed the previously unrecognized role of TRAFs in the regulation of IL-6 receptor signals, which is crucial for the differentiation of Th17 cells that induce autoimmune diseases.

After receiving his Ph.D., Dr. Nagashima worked as a research fellow for Young Scientists of JSPS (2016) and as an assistant professor (2017). He continued his research studying TNFR family members, focusing on type 2 innate lymphoid (ILC2) cells. He found that glucocorticoid-inducible TNF-related protein (GITR) provided co-signaling during ILC2 activation in the lung, resulting in exacerbated allergic immune responses.

In 2017, Dr. Nagashima joined Dr. John O’Shea’s lab at the NIAMS as a visiting fellow. He studied the molecular mechanisms of activation and differentiation of Th cells and ILCs and found that the neuropeptide CGRP is crucial for the regulation of ILC2s which induces type 2 immune responses following infection with helminth. Pursing his interest in the regulation of type 2 immunity, Dr. Nagashima also revealed a three-dimensional conformation of type 2 cytokine locus (ll4/ll13/ll5), underlying the cell-type specific control of these clinically significant cytokines.

Dr. Nagashima is currently working on multiple projects, including investigating the function of ILC2s in asthma and atopic dermatitis. He is also generating new research tools to further study how cytokines and neuropeptides rapidly control gene expression and alter chromatin structure toward a better understanding of the molecular basis of immune cell regulation in vivo.

Research Statement

Dr. Nagashima's research aims to understand how immune cells communicate with the tissues in which they reside and how signals derived from the tissue microenvironment (e.g., epithelial cells, neurons) change the cells' state through gene expression regulation. Using type 2 lymphoid cells (ILC2 and Th2) as a model system, he studies the molecular mechanisms by which cytokines and neuropeptides regulate the epigenome and chromatin architecture of lymphocytes by activating transcription factors during normal and pathological immune responses.

Scientific Publications

Remodeling of Il4-Il13-Il5 locus underlies selective gene expression.

Nagashima H, Shayne J, Jiang K, Petermann F, Pękowska A, Kanno Y, O'Shea JJ
Nat Immunol.
2024 Dec;
25(12).
doi: 10.1038/s41590-024-02007-4
PMID: 39567762

A CTCF-binding site in the Mdm1-Il22-Ifng locus shapes cytokine expression profiles and plays a critical role in early Th1 cell fate specification.

Liu C, Nagashima H, Fernando N, Bass V, Gopalakrishnan J, Signorella S, Montgomery W, Lim AI, Harrison O, Reich L, Yao C, Sun HW, Brooks SR, Jiang K, Nagarajan V, Zhao Y, Jung S, Phillips R, Mikami Y, Lareau CA, Kanno Y, Jankovic D, Aryee MJ, Pękowska A, Belkaid Y, O'Shea J, Shih HY
Immunity.
2024 May 14;
57(5).
doi: 10.1016/j.immuni.2024.04.007
PMID: 38697116

Transcription factor EGR2 controls homing and pathogenicity of T(H)17 cells in the central nervous system.

Gao Y, Wang Y, Chauss D, Villarino AV, Link VM, Nagashima H, Spinner CA, Koparde VN, Bouladoux N, Abers MS, Break TJ, Chopp LB, Park JH, Zhu J, Wiest DL, Leonard WJ, Lionakis MS, O'Shea JJ, Afzali B, Belkaid Y, Lazarevic V
Nat Immunol.
2023 Aug;
24(8).
doi: 10.1038/s41590-023-01553-7
PMID: 37443284

MicroRNA-221 and -222 modulate intestinal inflammatory Th17 cell response as negative feedback regulators downstream of interleukin-23.

Mikami Y, Philips RL, Sciumè G, Petermann F, Meylan F, Nagashima H, Yao C, Davis FP, Brooks SR, Sun HW, Takahashi H, Poholek AC, Shih HY, Afzali B, Muljo SA, Hafner M, Kanno Y, O'Shea JJ
Immunity.
2021 Mar 9;
54(3).
doi: 10.1016/j.immuni.2021.02.015
PMID: 33657395

Rapid Enhancer Remodeling and Transcription Factor Repurposing Enable High Magnitude Gene Induction upon Acute Activation of NK Cells.

Sciumè G, Mikami Y, Jankovic D, Nagashima H, Villarino AV, Morrison T, Yao C, Signorella S, Sun HW, Brooks SR, Fang D, Sartorelli V, Nakayamada S, Hirahara K, Zitti B, Davis FP, Kanno Y, O'Shea JJ, Shih HY
Immunity.
2020 Oct 13;
53(4).
doi: 10.1016/j.immuni.2020.09.008
PMID: 33010223

Neuropeptide CGRP Limits Group 2 Innate Lymphoid Cell Responses and Constrains Type 2 Inflammation.

Nagashima H, Mahlakõiv T, Shih HY, Davis FP, Meylan F, Huang Y, Harrison OJ, Yao C, Mikami Y, Urban JF Jr, Caron KM, Belkaid Y, Kanno Y, Artis D, O'Shea JJ
Immunity.
2019 Oct 15;
51(4).
doi: 10.1016/j.immuni.2019.06.009
PMID: 31353223

Education

Tohoku University 
Ph.D. in immunology (2016)

Experience

Research Fellow 
NIH/NIAMS (2022-present) 

Visiting Fellow 
NIH/NIAMS (2017-2022) 

Assistant Professor 
Tohoku University (2017) 

JSPS Research Fellow 
Tohoku University (2014-2016)

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