Th1_WT_NC.tracking_id	Th1_WT_NC.FPKM	Th1_S4KO_NC.FPKM	Th1_WT_Tbet.FPKM	Th1_S4KO_Tbet.FPKM	Th2_WT_NC.FPKM	Th2_S6KO_NC.FPKM	Th2_WT_Gata3.FPKM	Th2_S6KO_Gata3.FPKM
1500009L16Rik	2.06591002675514	1.18855284587551	1.67957693276182	1.6208491212376	3.08306696344777	1.35054250739506	2.03728732785646	1.81427970048573
4932438H23Rik	0.352930237332211	0.250005926256903	0.187131757093669	0.249905231118197	2.03297536624828	0.147271526553719	2.19658501324317	1.83883884719781
5730469M10Rik	1.47320504147396	1.49146319538741	1.11905067186707	1.12407001509356	2.89292137387044	1.51688252099088	2.5075815495025	2.43833810145198
9230102O04Rik	0.549166419109095	0.511471075460059	0.0743544455628281	0.175390464933549	1.27469701360195	0.263052439409095	0.983973134226309	0.863028948849325
9430020K01Rik	1.85811630362738	1.07348436494917	1.40798353734856	1.23375310789793	3.34141083111689	0.769205550167342	3.92520191933591	3.62411259527037
Abcg2	1.48912157428204	0.99421619891627	1.26234294878522	0.551069051306372	2.60725691939656	0.915754160614808	2.10804933461856	1.76910312153291
Acat2	2.87049098070111	3.04394287871163	2.86033117024749	2.7383722571902	3.93744797619556	2.70451567214915	3.22842160617932	2.94838031507552
Acat3	1.09881029651699	1.17005964669611	1.16026192132809	0.884933892086395	2.46355445294486	1.05794928037458	1.61188528718351	1.21788831116454
Adam8	3.98209003927158	1.03446224860072	3.14216507035088	1.23524301725215	2.87306705534847	1.06844381337355	2.2822292421635	2.02830746318743
Adap1	2.66537685218785	1.56199080847877	2.2638607131876	1.81272411007543	2.53166841131515	1.46033367673955	1.51041511017572	1.34126848976859
Apbb2	0.290940992010727	0.129477297787079	0.27421752231496	0.188327490253069	1.24559909992026	0.146021704733861	2.14944147961865	2.38431234234846
Aqp9	1.84607202963046	1.07942931500292	1.62034711435658	1.68430708467422	1.78534966940931	0.506684193874798	1.02171423513004	0.562120774710551
Armcx6	1.0197161456428	0.205632733620483	0.791108905348668	0.224602173549955	1.66311231195935	0.212162151919574	1.20974655385482	0.724898193177914
Asb2	1.75921123904518	0.432062520296567	1.45097102740195	0.345038638056487	4.18989570373053	0.350851371107393	5.68075192539435	5.80140443147907
Asns	5.13812227442845	3.71782445448764	5.33333785646448	4.39652258375192	4.89034454275258	3.53267852297781	4.80488476957572	4.49752295279645
Atf3	6.28634890800971	4.38470605612181	5.47234804423089	4.46088669505886	5.47397843582133	4.121670269024	5.4485937512273	5.58468595766876
Bnip3	4.84811712613261	3.6140619580299	4.35776311527488	3.28239680523281	4.98240497191886	3.56392687468607	5.10541827554019	5.29366108352631
C2cd4b	2.9668992301143	1.8665717386114	4.08968457729735	3.36647329585178	2.84702877386753	1.67040981930041	1.11916358348914	0.628326605397815
Cdc42se1	6.50879308349803	6.17912086474734	6.44830465930922	6.32873774938338	7.0588576212267	5.94312195144792	6.641135588706	6.15981282068794
Cetn4	2.85234248530422	1.47500703759102	2.43885172110143	1.59037207046624	2.42908297237048	1.36755558460919	2.66672932809886	2.62958510156439
Chd7	5.37377695550927	3.69936284388059	4.9306143484811	3.84166120553039	4.99817744678192	3.93299657825779	5.02136867825973	4.8865355154546
Col6a1	0.227143422520795	0.0317400184674486	0.0725096299499077	0.0524854534694371	1.18628502471154	0.0396766188289772	0.286109927618625	0
Col6a2	0.185066023853155	0.0887987352456167	0.0666536862465066	0.0339224972242536	1.29221044666062	0.0631754340691768	0.313654509118828	0.0247980866274066
Crem	6.71263704687746	5.07444549408511	6.65879701239665	4.51220159803569	6.4527074408394	5.43531522052406	6.60097142163137	6.80003272843246
Csf2	7.67948713702507	4.80029940680547	7.01630687796291	5.28026968291294	6.68170224888813	5.23404139971217	8.26341944882628	8.90449312977032
Cuedc1	1.70978027479402	1.73090510487558	1.64555871910339	1.53039541198369	2.31895018643321	1.15629952752728	2.87584099304377	2.39890577763557
Cyp11a1	1.33566618233615	0.40234453855633	0.665209011295115	0.66862747389567	2.96535949270961	0.572594795066156	6.77205719198596	8.37124955606402
Cysltr1	3.75921976274015	1.00728880702138	2.64023220863101	0.398623996717745	3.37517291791721	1.47271650497552	2.31837180009924	3.09303614067371
Dapk1	1.00608972930657	1.30733525704353	0.864403684187835	1.15892510285301	1.95836014991537	0.907979707706413	1.45024261479169	1.06308871201928
Dclk2	1.24284636403616	0.77897472580455	0.937734582738417	0.71519930463569	1.98605772755428	0.728920086372735	1.29750252376066	0.939339430814134
Dhcr24	3.96454649855644	4.2061587021379	3.89034940719884	3.84700471260858	4.76018900452529	3.67950261944739	4.43884506916598	4.45653019755977
Dhcr7	2.14403331349391	2.16804185741562	2.11500326974622	1.77895706942188	2.99647009913737	1.96794693629817	2.38727154229272	2.52162367968523
Egln3	6.93442214303666	4.28939185279763	6.09402277509931	3.95343287621323	6.18821693601933	4.90984509311603	6.39720228422303	6.94821536095546
Emilin2	1.18444534579644	0.202815132843986	0.697844974152665	0.104904366030016	1.59232546944148	0.0796507679427773	0.547869299728432	0.78700945714909
Eno1	3.8680545588962	2.8952037235255	3.60028164903253	2.73455572454689	3.54282758516116	2.31256933918312	3.63610254597701	3.6872958911838
Errfi1	5.28431053660455	3.80429109658428	4.77116193724826	3.86882502355584	5.17046991664692	3.50126078772752	6.27080362629572	5.87525910500727
Faim3	0.504107795058856	0.384652185845287	0.519696884071349	0.31039945604283	2.06342010576303	0.453464901118552	1.57639636522601	1.71792971203584
Fam20b	3.29978534727099	3.08285413927688	3.07636754395607	2.63288239360441	3.84914859902853	2.74330168244913	4.28425500526135	3.78710853225003
Fam46a	3.09220574638052	1.37669045899532	2.2568174410838	0.9379469587418	4.35790383855249	1.4991800213456	5.57940343956677	5.08968881398235
Fam71b	4.17412673742093	2.12192716138066	3.4340210004483	1.98386736653313	3.18489596685492	2.03521215507566	3.21936215780772	2.99472452949951
Fmnl3	2.17135736722564	2.72080815887655	2.19715770607627	2.18330547147169	3.37039726953225	2.25390760193606	3.23124345709491	2.81330919243699
Galk1	5.54601468776588	5.79639009733101	5.57326847767598	5.92372918514295	6.02531234304607	5.02123985053526	5.69264200171056	6.01139500090811
Gm5127	0.680688923252735	0.120869200456272	0.392337208175079	0	1.43162830797044	0.198976857100351	0.651403981566509	0.670872959269912
Gm6460	1.40088763144967	0	0.567011882806916	0	1.1865639435561	0.0509114795637421	0.614241510516829	0.579173388495996
Gmds	2.606373526732	2.38860285761182	2.55890188853053	2.74842044194259	3.12423548188683	2.07539571410918	3.51956706471902	3.32544254396153
Gp49a	7.52760211240087	4.09795626049879	7.65080045375	5.70343297745467	5.41944113550055	4.38244592109257	4.88854357095676	5.48529800936214
Gzmb	8.63093325057046	5.15814310351053	8.10012615597715	5.91695666672853	6.56979182461391	5.50598617493806	6.2560916638728	8.26519307558829
H2-Ab1	3.73307228243384	2.28394547141548	3.49008230410477	1.9110242410079	3.65514571459822	2.37112389767409	3.92079825038781	4.71800536115546
Hif1a	7.84163982190016	6.00280151664293	7.50044356507596	6.18000261342065	7.30041662783687	6.28530788571788	7.35015244420105	7.5692784148682
Hip1	1.03043496227986	0.613020490012378	1.25621359580552	1.7090303094626	1.53791724903408	0.410940203427287	0.842612028960042	0.575853481885794
Htr1b	0.293362243573069	0.160487831059338	0.0819707025774004	0	4.35881117404759	0.15136658026921	5.1033633511927	4.72155312179215
Icos	6.84886076209123	4.7618065070456	6.45897414620868	4.14024695250005	6.7600479191581	5.27466049079963	6.39570035177426	6.78212020679743
Id2	7.18503398106342	5.25095020771869	7.17022553160503	5.81325787891584	6.49330628021171	5.36916632719041	6.56977815630765	6.31951136099383
Il13	5.42559022098317	3.92966792793187	4.52994584978325	3.34039420591611	5.31853377164753	4.02566670038848	6.40092041165411	9.27854238244459
Il1a	3.47892004822866	2.27968820361778	3.1506522790283	2.49538305653516	3.39445514884535	1.30121887822885	5.12174899896228	4.87427565265531
Il31	4.01894568003289	5.14995436503271	2.83343459202423	4.24377569511531	7.10395916114653	3.72281572633704	7.23350464001073	7.41212098557201
Il4	3.4266928025605	3.79433268153519	2.39045583263311	2.53680887333427	7.44343260262791	3.27875794359686	8.44733123269238	9.15686427187818
Il4ra	6.53903315155147	6.14287901176496	6.04128022333238	5.19020000599213	6.8743912430707	5.80517635422525	6.30905792297424	6.09556370114658
Il5	0.359798887791668	0.0886079883464366	0.171028721743824	0.0596660743064441	4.03594056413256	0.136522813636301	5.63695517007944	7.70441551825132
Il9	0	0.229505480668519	0.330495298668934	0.119588052125509	2.0979175052572	0.216745392653302	7.84555277545215	8.80904137392618
Jdp2	0.830024864033924	0.436867552947044	0.579048812480215	0.322745006031119	1.71057393102951	0.16576147286576	3.31704497365687	3.06306281867692
Klk8	3.66802832918995	3.5531638705095	3.59328205279138	3.45075993116042	4.79933084394736	3.17231468898259	4.90211217933057	4.6130895830383
Ldlr	3.46687505175107	4.07416287550701	3.35383703626938	3.80271021929134	4.97605196527546	3.6724253419715	3.9283418952504	3.47292961038627
Lrrc6	0.192657521133462	0.44131349077122	0.0830299172729882	0.143175267232858	2.0135372958635	0.340653413711525	1.2443695440426	1.00721703400532
Mapk13	0.710916831799378	0.307272297634337	0.305487304985823	0.0669129193028046	1.55076278959146	0.290608415372892	1.20673073316023	0.989700713253055
Mboat1	3.44887584908996	3.16820075240073	3.20887149127531	3.17422742886625	4.30483955337681	3.30414302002552	4.56497561083622	4.46673151753352
Mcf2l	0.961274372422155	0.331631847543435	0.565233531886184	0.119147245060086	1.30788312109075	0.182104931172822	0.376271488131886	1.65390382716678
Mmp10	2.09039616590297	0.128185557834805	1.56407569529529	0.0782537620393291	3.00423889673498	0.12082369219385	1.63454680408913	1.2514827893424
Mt1	3.1616732771269	0.326470619074936	2.61805536999044	0.593669288663792	4.02682661176883	0.308872246339383	5.90321907784673	6.04965908120814
Mt2	2.88362081628567	1.14925286099875	2.31024122280434	1.15100801212063	2.49429783456651	1.46245548393986	3.84439569679273	4.51516996445017
Myo6	2.92363031558785	2.91238544237216	2.646842361293	1.60566974125159	4.68730709036283	2.91759597076057	4.23196226193495	4.49262873712027
Nrgn	0.318968112704546	1.05975673956707	0.442774740407573	0.331419744422908	3.26132470122907	1.1932671060636	4.21972612567263	3.85143923467359
Nts	1.74365714093505	1.1819930247514	2.03384935953821	1.35478500840428	2.44515989462889	1.02167160019803	3.31022231509854	3.85398566999777
P4ha2	3.00661938500997	1.92876067438061	2.06282630464183	1.2152934123936	3.35370156081558	1.93780763758616	3.61346093083939	4.41948495798078
Pde7b	0.0292652967324893	0.0702535707708773	0.0303194087015989	0	1.10514166032342	0.0475520688256426	0.641486840384531	1.44824022521607
Penk	4.31963960914312	4.24296827763428	4.80348020926605	4.79805570057789	7.18277173888847	5.09119205151613	7.81506301719287	7.98796315885471
Pik3cg	2.23791853605762	1.74285561972919	2.35668190274123	1.72344934499596	3.23611295212048	1.95320190433687	2.73371876490934	2.79445953645796
Pip5k1b	1.13120752453948	1.37413807379825	0.987208065690429	1.10119958373647	2.46129280572762	1.30692713798249	3.50761706680431	4.08725066461331
Pmvk	4.11070566738347	3.52945866592719	3.69920735232895	2.97612347209679	4.54502932363692	3.51951674399906	3.68702708480318	3.51077207849273
Pparg	0.231339011197334	0.175141321836571	0.105474665007053	0.106126906119203	1.2854850789671	0.16523278814664	1.14213892391364	2.43972684831151
Prdm1	1.98984019750306	0.469748470988622	1.67189569081456	0.327126270872785	1.92434696639901	0.744819847661622	3.02529107883747	3.08941170857949
Psph	4.40229923715051	3.65382817955751	4.51545384963482	3.99218833625331	4.12402202617349	3.06140640560084	3.87931367631089	3.97791182292139
Ptpn13	1.25606259498681	0.787625535348422	0.910028792699313	0.396989129010338	2.65774746026608	0.832109026381167	3.19679901299223	2.90045337738267
Ptprn	2.19320716865339	1.75209773349872	2.2026747350594	1.79749863800955	2.94853730771152	1.69357839498296	2.5355528451339	2.7317436979372
Ramp3	6.2326914521029	3.84705483977856	6.19632179722799	3.16050719310467	5.67689359881062	3.2368461692789	5.01421690903136	6.2443752529421
Rasgrp4	0.922981791508756	0.92042822495689	0.696132732610413	0.715643018180544	2.51073410733793	0.932276652151288	2.35956333743726	2.62931698185315
Rhob	1.77774583031385	1.27075018848876	1.83150030813843	1.69737350954143	2.13977070722328	1.084016627845	2.05855894497227	2.12924344533829
Sap30	4.05720763639927	3.71189131799661	4.19024347250464	4.03420690979932	4.41543418587318	3.34520474142226	3.61343735604277	3.42935217124818
Sc4mol	4.03826935600706	4.52513551696687	3.75538968635812	4.08998958682088	5.46219959185281	4.09589067235141	4.67574819742072	4.33925855480973
Scarna6	2.66990663186048	1.92559692643146	1.93325536153446	2.14437273429198	2.19482775646354	1.0374173663994	2.33746848205966	2.03597926157121
Sdf2l1	4.4329326904539	4.36223140705021	4.35145872332158	4.70015670020156	4.78573362325031	3.66198896519149	4.44205438912805	4.44463394065702
Serpine1	2.15841782099799	1.48938365496169	1.06691581165119	1.70195707900497	3.17147746750866	2.05524772362397	4.97956352736198	4.96334464553299
Slc16a3	6.22649889639617	4.78778766145553	5.90045144518586	4.62980538873194	5.81184604139409	4.80978484619397	5.61008877131426	5.67390687943237
Snhg9	2.69191377156286	0	2.29552026903477	1.58075331480641	1.61007163962799	0	0	1.65538388814614
Spns3	0.0238132994226993	0.073282120783649	0	0.0732640202625489	1.21425538821819	0.0689981741596864	2.81631503031585	3.10292682718626
Timp1	3.8809107757406	2.75401948673917	3.51650689104327	2.68698451919971	3.65485939627402	2.09261001023109	4.99696263689426	5.13000006425687
Tmtc2	1.09178783161976	0.192976859648366	0.943947574177709	0.26207228839841	1.46680459128326	0.126051721190704	2.79244934208712	2.96868983005784
Tnip3	3.10071699745403	1.34807374805867	3.76717805811926	2.4242932907913	2.97553664466829	0.942660128084093	3.15768728028609	3.29945421733254
Tpbg	2.93230689249633	2.12050788103307	2.81150802223612	1.87568571480371	2.88823474625635	1.65285357538155	4.14757534722153	3.81347338344098